* Personal information

  • Natalia Kwasnikowska

    Uhasselt logo
    Hasselt University
    Theoretical Computer Science Group
    Agoralaan, gebouw D
    BE-3590 Diepenbeek
    Belgium

    Office: D6
    Tel: +32 11 268208
    Fax: +32 11 268299
    E-mail: FirstName (DOT) LastName (AT) uhasselt (DOT) be
  • Currently I am a Ph.D. student at the Theoretical Computer Science Group of Hasselt University. My supervisor is Jan Van den Bussche.

* Research

  • I am involved in research on formal models for dataflows (data-centered workflows) and dataflow repositories. See our project web page for more information.

* Publications

  • "A formal model of dataflow repositories." (pdf - presentation)
    Jan Hidders, Natalia Kwasnikowska, Jacek Sroka, Jerzy Tyszkiewicz, and Jan Van den Bussche
    In proceedings of the 4th Int. Workshop on Data Integration in Life Sciences (DILS), June 27-29, Philadelphia, PA, USA
    LNBI vol. 4544/2007, pp 105-121
  • "Modeling and storing scientific protocols." (pdf - presentation)
    Natalia Kwasnikowska, Yi Chen, and Zoé Lacroix
    In proceedings of the First Int. Workshop in Knowledge Systems in Bioinformatics (KSinBIT), October 2006, Monpellier, France
    LNCS vol. 4277/2006, pp 730-739
  • "Lumbar cerebrospinal fluid proteome in multiple sclerosis: Characterization by ultrafiltration, liquid chromatography, and mass spectrometry." (pdf)
    Jean-Paul Noben, Debora Dumont, Natalia Kwasnikowska, Peter Verhaert, Veerle Somers, Raymond Hupperts, Piet Stinissen, and Johan Robben
    Journal of Proteome Research 2006 5(7):1647-1657
  • "Petri net + nested relational calculus = dataflow." (pdf)
    Jan Hidders, Natalia Kwasnikowska, Jacek Sroka, Jerzy Tyszkiewicz, and Jan Van den Bussche
    In proceedings of the 13th Int. Conf. on Cooperative Information Systems (CoopIS), November 2005, Agia Napa, Cyprus
    LNCS vol. 3760/2005, pp 220-237
  • "Well-constructed Workflows in Bioinformatics." (pdf)
    Anna Gambin, Jan Hidders, Natalia Kwasnikowska, Slawomir Lasota, Jacek Sroka, Jerzy Tyszkiewicz, and Jan Van den Bussche
    Workshop on Database Issues in Biological Databases (DBiBD), January 2005, Edinburgh, UK

* Posters

  • "An algorithm to find co-regulated gene clusters: Adjustment for random variability of gene expression" (abstract - poster)
    Ivy Jansen, Kerstin Koch, Natalia Kwasnikowska, and Tomasz Burzykowski
    Poster at the 11th Int. Conf. on Research in Computational Molecular Biology (RECOMB), april 2007, San Francisco Bay Area, CA, USA
  • "NRC as a formal model for expressing bioinformatics workflows." (abstract - poster)
    Anna Gambin, Jan Hidders, Natalia Kwasnikowska, Slawomir Lasota, Jacek Sroka, Jerzy Tyszkiewicz, and Jan Van den Bussche
    Poster at the 13th Int. Conf. on Intelligent Systems for Molecular Biology (ISMB), June 2005, Detroit, MI, USA